PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G52110.1   interferon-activable protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G52110.2 11Arabidopsis thaliana036290910 (0)_
AT3G52110.3 11Arabidopsis thaliana03211001000 (0)_
AT3G52110.4 11Arabidopsis thaliana02661001000 (0)_
Os03g07810.1 7Oryza sativa2E-3343331420 (0)_
Zm00001eb402070_P002 agpv5Zea mays1E-3743331420 (0)_
Zm00001eb005640_P002 agpv5Zea mays5E-3743831430 (0)_
v1_GRMZM2G142609_P01 4a53Zea mays5E-3743831430 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM:
TargetP: Cytoplasm (Class 1 C0.024; M0.133; S0.066; _0.948)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 362 aa (-cTP 311)
Molecular Weight 41.98 kDA(-cTP )
PI 9.13(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help