PPDB

 The Plant Proteome Database

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AT3G52080.1   cation/hydrogen exchanger 28
Lab Annot.
Mapman: 34.12 transport.metal
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G13620.1 11Arabidopsis thaliana3E-9676230510 (0)_
AT1G05580.1 11Arabidopsis thaliana3E-7778428471 (1)_
AT5G41610.1 11Arabidopsis thaliana1E-7578427470 (0)_
Os12g44300.1 7Oryza sativa1E-14082735530 (0)_
Os01g60140.1 7Oryza sativa1E-8478329500 (0)_
Os05g40650.1 7Oryza sativa3E-7978528470 (0)_
Zm00001eb133960_P001 agpv5Zea mays7E-14484033540 (0)_
GRMZM2G457523_P01 3.21Zea mays7E-14484033541 (1)_
GRMZM2G037343_P01 3.21Zea mays8E-8578529482 (2)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: FAM72(1) Na_H_Exchanger(1) Usp(2)
TargetP: Cytoplasm (Class 2 C0.026; M0.155; S0.071; _0.904)
Predotar:
Subcel. Location:
TM-HMM prediction: 11 TMs
Aramemnon: 9 TMs
TAT position:
Length 801 aa (-cTP 711)
Molecular Weight 88.71 kDA(-cTP )
PI 8.98(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1511Detail        [A. thaliana]  
1512Detail        [A. thaliana]  
1873Detail       Total leaf [A. thaliana] Stroma wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

 17432890(leaf total membranes)
19546170(mature pollen grains)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help