PPDB

PPDB	The Plant Proteome Database

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AT3G51950.1 Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein

Lab Annot.

Zinc finger (CCCH-type) protein / RNA recognition motif (RRM)-containing protein
Mapman: 27.3.99 RNA.regulation of transcription.unclassified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G51950.3 11 Arabidopsis thaliana 0 540 100 100 0 (0) _
AT3G51950.4 11 Arabidopsis thaliana 0 540 100 100 0 (0) _
AT3G51950.2 11 Arabidopsis thaliana 0 540 100 100 0 (0) _
Os03g21140.1 7 Oryza sativa 3E-118 621 42 53 0 (0) _
Os03g21140.2 7 Oryza sativa 3E-118 621 42 53 0 (0) _
Os03g21160.2 7 Oryza sativa 2E-107 611 42 54 0 (0) _
v1_GRMZM2G346113_P02 4a53 Zea mays 3E-98 471 43 54 0 (0) _
GRMZM2G346113_P02 3.21 Zea mays 3E-98 471 43 54 0 (0) _
GRMZM2G044004_P01 3.21 Zea mays 7E-88 472 43 55 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	RL(1) RNA_bind(1) RRM_1(1) Torus(1) zf-CCCH(1) zf-CCCH_2(1) zf-CCCH_4(1) zf_CCCH
TargetP:	Cytoplasm (Class 1 C0.047; M0.046; S0.039; _0.929)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	540 aa (-cTP 444)
Molecular Weight	59.79 kDA(-cTP )
PI	6.48(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19200160(flower-stage 12)
19245862(nuclear phosphoproteins (seedlings & cell culture))
20706207(contaminants cell cycle interactome (cell culture))
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data