PPDB

 The Plant Proteome Database

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AT3G51930.1   Transducin/WD40 repeat-like superfamily protein
Lab Annot.
Mapman: 31.1 cell.organisation
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G26490.1 11Arabidopsis thaliana3E-7934142620 (0)_
AT1G47610.1 11Arabidopsis thaliana4E-7434641570 (0)_
AT3G18950.1 11Arabidopsis thaliana7E-7443237530 (0)_
Os01g71780.1 7Oryza sativa2E-13837058700 (0)C
Os12g40260.1 7Oryza sativa3E-8034241590 (0)_
Os03g52870.1 7Oryza sativa3E-6835539560 (0)_
GRMZM2G076034_P01 3.21Zea mays7E-12536055680 (0)C
v1_GRMZM2G076034_P01 4a53Zea mays7E-12536055680 (0)C
Zm00001eb215260_P001 agpv5Zea mays3E-6335539560 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF5710(2) Nucleoporin_N(2) Nup160(2) PQQ_3(4) WD40(7)
TargetP: Chloroplast (Class 1 C0.953; M0.040; S0.015; _0.115)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 415 aa (-cTP 358)
Molecular Weight 45.28 kDA(-cTP 39.42)
PI 9.17(-cTP 9.12)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help