PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G51890.1   Clathrin light chain protein

Lab Annot. Clathrin light chain protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G40060.1 11Arabidopsis thaliana7E-66217576924 (16)_
AT2G20760.1 11Arabidopsis thaliana3E-49207506119 (11)_
Os04g58240.1 7Oryza sativa2E-50168586818 (18)_
Os06g51510.1 7Oryza sativa2E-47153587113 (13)_
Os07g27750.1 7Oryza sativa8E-4115950660 (0)_
Zm00001eb229020_P001 agpv5Zea mays2E-4918750640 (0)_
v1_GRMZM2G112805_P01 4a53Zea mays2E-4918750642 (2)_
GRMZM2G112805_P01 3.21Zea mays2E-4918750645 (5)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Clathrin_lg_ch(1) Sec1(1)
TargetP: Cytoplasm (Class 2 C0.247; M0.098; S0.052; _0.872)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 258 aa (-cTP 192)
Molecular Weight 29.18 kDA(-cTP )
PI 5.32(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1875Detail       Total leaf [A. thaliana] total soluble wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

19376835(leaf phosphoproteins)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help