PPDB

The Plant Proteome Database

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AT3G51810.1   Stress induced protein

Lab Annot. ABA-inducible protein that accumulates during seed maturation
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G51810.2 11Arabidopsis thaliana6E-6215272730 (0)_
AT2G40170.1 11Arabidopsis thaliana4E-256575906 (4)_
Os05g28210.1 7Oryza sativa1E-236771850 (0)_
Os01g06630.1 7Oryza sativa2E-084957710 (0)_
GRMZM2G162659_P01 3.21Zea mays1E-4415257630 (0)_
v1_GRMZM2G162659_P01 4a53Zea mays1E-4415257630 (0)_
Zm00001eb286150_P001 agpv5Zea mays1E-4415257630 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CW_7(4) KGG(5) LEA_5(2)
TargetP: Cytoplasm (Class 2 C0.155; M0.114; S0.079; _0.861)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 152 aa (-cTP 129)
Molecular Weight 16.61 kDA(-cTP )
PI 5.76(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2291Detail        [A. thaliana] Clp C1 TRAP
2301Detail        [A. thaliana] Clp C1 TRAP
2307Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

11402211,12068122,15047896,16679420,17028149(seed-all-Jobpapers)
17293592(total seedlings û light and dark grown)
18599647(seed proteome)
18436743(specific to seeds)
19546170(mature pollen grains)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help