PPDB

The Plant Proteome Database

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AT3G51610.1   ATP-dependent helicase/deoxyribonuclease subunit B

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os05g07640.1 7Oryza sativa3E-100197708115 (15)S
GRMZM2G063754_P01 3.21Zea mays2E-10520068841 (1)M
Zm00001eb281990_P001 agpv5Zea mays2E-10520068840 (0)M
v1_GRMZM2G063754_P01 4a53Zea mays2E-10520068842 (2)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF4229(3) MHB(1)
TargetP: Secreted (Class 4 C0.033; M0.218; S0.569; _0.043)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 1 TMs
TAT position:
Length 230 aa (-cTP 190)
Molecular Weight 26.07 kDA(-cTP )
PI 9.28(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1432Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))

Comparative Proteomics Data


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