PPDB

 The Plant Proteome Database

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AT3G51600.1   lipid transfer protein 5
Lab Annot. LTP5 (LIPID TRANSFER PROTEIN 5); lipid transporter
Mapman: 11.6 lipid metabolism.lipid transfer proteins etc
Curated Location nucleus (Pubmed: 10737809 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G38540.1 11Arabidopsis thaliana3E-461186174128 (126)S
AT2G38530.1 11Arabidopsis thaliana5E-42118557219 (17)S
AT5G59320.1 11Arabidopsis thaliana2E-34118506729 (27)S
Os11g02400.1 7Oryza sativa9E-229547670 (0)S
Os12g02330.2 7Oryza sativa1E-219646660 (0)S
Os12g02340.1 7Oryza sativa2E-219546660 (0)S
Zm00001eb163880_P001 agpv5Zea mays2E-219247630 (0)S
v1_GRMZM2G107839_P01 4a53Zea mays2E-2192476321 (20)S
GRMZM2G107839_P02 3.21Zea mays2E-2192476324 (24)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: LTP_2(1) NIP_1(2) Tryp_alpha_amyl(1)
TargetP: Secreted (Class 2 C0.004; M0.006; S0.939; _0.147)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 118 aa (-cTP 43)
Molecular Weight 12.49 kDA(-cTP )
PI 10.43(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1507Detail        [A. thaliana] wild-type
1875Detail       Total leaf [A. thaliana] total soluble wild-type
2013Detail       leaf [A. thaliana] total leaf tissue wt
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2020Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2021Detail       leaf [A. thaliana] total leaf tissue  
2044Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2045Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2046Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2047Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2048Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2050Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2051Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2054Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2063Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2066Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2067Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2070Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2071Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2074Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2147Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2148Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2150Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2218Detail       Total soluble [A. thaliana] Total soluble proteins cGEP strep
2220Detail       Total soluble [A. thaliana] Total soluble proteins cGEP strep
2221Detail       Total soluble [A. thaliana] Total soluble proteins cGEP strep

* For details about the exprimental sources click here.

Published Proteomics Data

 15593128(Cell Wall proteome)
19429840(ubiquitinated or associated with ubiquitinated proteins (seedlings))
19888209(80S polysomal fraction)
19329564(peroxisomes (leaf))
WallDB-E.Jamet(cell wall reference proteome)
21533090(plasmodesmata-crude)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data

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