PPDB

The Plant Proteome Database

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AT3G51510.1   transmembrane protein

Lab Annot. unknown protein - C/M
Mapman: 35.2 not assigned.unknown
Curated Location thylakoid (Pubmed: 23198870 18431481 )

TAIR curated location: thylakoid membrane (sensu Viridiplantae)15322131
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os05g41190.1 7Oryza sativa8E-4413265746 (6)C
Os05g41190.2 7Oryza sativa1E-177062673 (3)C
GRMZM2G117558_P01 3.21Zea mays4E-54183506345 (45)C
Zm00001eb291320_P001 agpv5Zea mays4E-5418350630 (0)C
v1_GRMZM2G117558_P01 4a53Zea mays4E-54183506343 (43)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: SCAMP(2)
TargetP: Chloroplast (Class 4 C0.766; M0.025; S0.026; _0.482)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 2 TMs
Aramemnon: 2 TMs
TAT position:
Length 181 aa (-cTP 145) (-lTP 65)
Molecular Weight 19.85 kDA(-cTP 16.07)(-lTP 7.22)
PI 6.21(-cTP 5.74)(-lTP 5.176)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
46Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
107Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1432Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1553Detail       leaf [A. thaliana] TiO2 thylakoid membranewt
1554Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3
1575Detail       leaf [A. thaliana] TiO2 thylakoid membraneWT
1620Detail        [A. thaliana] m48
1675Detail       Rosettes [A. thaliana]  
1676Detail       Rosettes [A. thaliana]  
1678Detail       Rosettes [A. thaliana]  
1695Detail       Rosettes [A. thaliana] Thylakoids thylakoid membraneWild-type
1699Detail       Rosettes [A. thaliana] Thylakoids thylakoid membranek5-1
1744Detail        [A. thaliana] Mep-6
1745Detail        [A. thaliana] Col-0
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2013Detail       leaf [A. thaliana] total leaf tissue wt
2320Detail        [A. thaliana] Thylakoids plastoglobule 
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 

* For details about the exprimental sources click here.

Published Proteomics Data

15028209(Total chloroplast)
14729914(thylakoid stripped)
15322131(Thylakoid-stripped)
19525416(leaf (wt and clpr4-1 mutant))
19995723(chloroplast reference proteome)
21515685(GreenCut2)

Comparative Proteomics Data


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