PPDB

 The Plant Proteome Database

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AT3G51420.1   strictosidine synthase-like 4
Lab Annot. strictosidine synthase protein
Mapman: 16.4.1 secondary metabolism.N misc.alkaloid-like
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G51430.1 11Arabidopsis thaliana036977893 (3)S
AT3G51430.2 11Arabidopsis thaliana036977883 (3)S
AT3G51440.1 11Arabidopsis thaliana036978860 (0)S
Os10g39710.1 7Oryza sativa9E-12035449670 (0)S
Os10g39710.2 7Oryza sativa2E-9426854690 (0)S
Os07g42250.1 7Oryza sativa6E-5232633530 (0)S
Zm00001eb109110_P003 agpv5Zea mays4E-4832033540 (0)S
v1_GRMZM2G101142_P01 4a53Zea mays4E-4832033548 (8)S
GRMZM2G101142_P01 3.21Zea mays4E-4832033540 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Arylesterase(2) NHL(4) SGL(1) Str_synth(1)
TargetP: Secreted (Class 1 C0.008; M0.035; S0.986; _0.014)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 370 aa (-cTP 333)
Molecular Weight 41.60 kDA(-cTP )
PI 5.65(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1126Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3
1395Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1397Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1421Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1441Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 3)
1447Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 3)
1448Detail       leaf [A. thaliana] total tissue (3 day HL) abck2xabck3 (rep. 1)
1450Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
1611Detail       leaf [A. thaliana] chloroplast fractionation thylakoid membrane 
1618Detail        [A. thaliana] m48
1619Detail        [A. thaliana] m48
1620Detail        [A. thaliana] m48
1621Detail        [A. thaliana] m48
1622Detail        [A. thaliana] m48
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2013Detail       leaf [A. thaliana] total leaf tissue wt
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2020Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2320Detail        [A. thaliana] Thylakoids plastoglobule 
2321Detail       leaf [A. thaliana]  
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 

* For details about the exprimental sources click here.

Published Proteomics Data

 19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
19376835(leaf phosphoproteins)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data

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