PPDB

PPDB	The Plant Proteome Database

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AT3G51420.1 strictosidine synthase-like 4

Lab Annot.

strictosidine synthase protein
Mapman: 16.4.1 secondary metabolism.N misc.alkaloid-like

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G51430.1 11 Arabidopsis thaliana 0 369 77 89 3 (3) S
AT3G51430.2 11 Arabidopsis thaliana 0 369 77 88 3 (3) S
AT3G51440.1 11 Arabidopsis thaliana 0 369 78 86 0 (0) S
Os10g39710.1 7 Oryza sativa 9E-120 354 49 67 0 (0) S
Os10g39710.2 7 Oryza sativa 2E-94 268 54 69 0 (0) S
Os07g42250.1 7 Oryza sativa 6E-52 326 33 53 0 (0) S
Zm00001eb109110_P003 agpv5 Zea mays 4E-48 320 33 54 0 (0) S
v1_GRMZM2G101142_P01 4a53 Zea mays 4E-48 320 33 54 8 (8) S
GRMZM2G101142_P01 3.21 Zea mays 4E-48 320 33 54 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Arylesterase(2) NHL(4) SGL(1) Str_synth(1)
TargetP:	Secreted (Class 1 C0.008; M0.035; S0.986; _0.014)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	370 aa (-cTP 333)
Molecular Weight	41.60 kDA(-cTP )
PI	5.65(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
371	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
451	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
528	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt2)
1126	Detail								leaf [A. thaliana]	chloroplast plastoglobule	k2k3
1395	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1397	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 3)
1401	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1421	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1431	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
1441	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 3)
1447	Detail								leaf [A. thaliana]	total tissue (3 day HL)	wild-type (rep. 3)
1448	Detail								leaf [A. thaliana]	total tissue (3 day HL)	abck2xabck3 (rep. 1)
1450	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 3)
1611	Detail								leaf [A. thaliana]	chloroplast fractionation thylakoid membrane
1618	Detail								[A. thaliana]		m48
1619	Detail								[A. thaliana]		m48
1620	Detail								[A. thaliana]		m48
1621	Detail								[A. thaliana]		m48
1622	Detail								[A. thaliana]		m48
2010	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2013	Detail								leaf [A. thaliana]	total leaf tissue	wt
2014	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2020	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
19376835(leaf phosphoproteins)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data