PPDB

The Plant Proteome Database

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AT3G51320.1   Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.
Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G62890.1 11Arabidopsis thaliana1E-8443334570 (0)C
AT2G42920.2 11Arabidopsis thaliana5E-7949631520 (0)C
AT2G42920.1 11Arabidopsis thaliana5E-7949631520 (0)C
Os05g01635.1 7Oryza sativa9E-9841540560 (0)M
Os01g08120.1 7Oryza sativa5E-8140134550 (0)M
Os10g26070.1 7Oryza sativa9E-8141933540 (0)M
Zm00001eb065650_P001 agpv5Zea mays1E-10140641590 (0)_
Zm00001eb336860_P001 agpv5Zea mays3E-8539936550 (0)M
v1_GRMZM2G175253_P01 4a53Zea mays7E-8539936550 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF2650(1) PPR(11) PPR_1(7) PPR_2(7) PPR_3(6) TPR_19(2)
TargetP: Mitochondria (Class 5 C0.058; M0.268; S0.200; _0.247)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 530 aa (-cTP 434)
Molecular Weight 58.98 kDA(-cTP )
PI 8.46(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help