PPDB

PPDB	The Plant Proteome Database

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AT3G51120.1 zinc finger CCCH domain-containing protein 44

Lab Annot.

zinc finger (CCCH-type) protein
Mapman: 27.3.63 RNA.regulation of transcription.PHD finger transcription factor

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G16485.2 11 Arabidopsis thaliana 0 547 53 68 0 (0) _
AT2G16485.1 11 Arabidopsis thaliana 7E-177 562 51 66 2 (2) _
AT2G18090.2 11 Arabidopsis thaliana 1E-111 397 46 64 0 (0) _
Os09g36090.1 7 Oryza sativa 0 810 44 59 18 (18) _
Os10g36810.1 7 Oryza sativa 0 791 44 58 0 (0) C
Os01g66140.1 7 Oryza sativa 7E-68 558 31 51 0 (0) _
GRMZM2G393471_P01 3.21 Zea mays 0 850 42 56 0 (0) _
Zm00001eb043720_P001 agpv5 Zea mays 0 756 45 60 0 (0) C
Zm00001eb043720_P002 agpv5 Zea mays 0 756 45 60 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	GYF(1) GYF_2(1) Plus-3(1) SWIB(1) Torus(1) zf-B_box(1) zf-CCCH(1) zf-CCCH_2(1) z
TargetP:	Cytoplasm (Class 4 C0.050; M0.277; S0.037; _0.580)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1305 aa (-cTP 1287)
Molecular Weight	143.64 kDA(-cTP )
PI	6.33(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
543	Detail								leaf [A. thaliana]	stroma (FPLC) >600 kDa (HMA)	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data