PPDB

The Plant Proteome Database

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AT3G50880.1   DNA glycosylase superfamily protein

Lab Annot.
Mapman: 28.2 DNA.repair
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G19480.2 11Arabidopsis thaliana1E-9228253647 (7)C
AT1G19480.1 11Arabidopsis thaliana2E-9228253647 (7)C
AT1G75230.2 11Arabidopsis thaliana1E-9128453650 (0)C
Os05g50290.1 7Oryza sativa1E-9122760740 (0)C
Os05g49250.2 7Oryza sativa8E-7824651650 (0)C
Os05g49250.1 7Oryza sativa8E-7824651650 (0)C
GRMZM2G029974_P01 3.21Zea mays9E-9023357720 (0)C
Zm00001eb344580_P001 agpv5Zea mays9E-9023357720 (0)C
v1_GRMZM2G029974_P01 4a53Zea mays9E-9023357720 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: GAF(1) HhH-GPD(1)
TargetP: Chloroplast (Class 2 C0.843; M0.079; S0.006; _0.082)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 273 aa (-cTP 210)
Molecular Weight 30.29 kDA(-cTP 23.55)
PI 9.64(-cTP 8.81)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help