PPDB

The Plant Proteome Database

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AT3G50670.2   U1 small nuclear ribonucleoprotein-70K

Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
TAIR curated location: nucleus15133128
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G50670.1 11Arabidopsis thaliana2E-12016710010027 (25)C
AT2G43370.2 11Arabidopsis thaliana1E-075641580 (0)_
AT2G43370.1 11Arabidopsis thaliana1E-065641580 (0)_
Os10g02630.1 7Oryza sativa8E-76169698110 (10)_
v1_GRMZM2G113592_P03 4a53Zea mays6E-7316667782 (2)_
v1_GRMZM2G113592_P01 4a53Zea mays6E-7316667782 (2)_
GRMZM2G113592_P01 3.21Zea mays6E-7316667781 (1)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: RRM_1(1) U1snRNP70_N(1)
TargetP: Chloroplast (Class 5 C0.525; M0.123; S0.031; _0.467)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 204 aa (-cTP 187)
Molecular Weight 22.85 kDA(-cTP 21.08)
PI 9.30(-cTP 9.39)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19200160(flower-stage 12)
19546170(mature pollen grains)
19253305(phosphoproteins (etiolated seedling))
19376835(leaf phosphoproteins)
20166762(guard cells (Arabidopsis))
19114538(guard cells Arabidopsis leaf)
21166475(cytosolic-fractions-crude)
20813957(SUMO proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


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