PPDB

PPDB	The Plant Proteome Database

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AT3G50590.1 Transducin/WD40 repeat-like superfamily protein

Lab Annot.

Transducin/WD40 repeat-like protein
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G50590.2 11 Arabidopsis thaliana 0 1636 96 96 0 (0) _
Os09g24260.1 7 Oryza sativa 0 967 68 80 30 (30) C
GRMZM2G150772_P02 3.21 Zea mays 0 1685 65 76 79 (37) M
v1_GRMZM2G150772_P02 4a53 Zea mays 0 1685 65 76 33 (33) M
Zm00001eb051800_P004 agpv5 Zea mays 0 1685 65 76 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Atrophin-1(1) Coatomer_WDAD(4) DZR_2(1) Nucleoporin_N(4) TPR_1(2) TPR_19(3) TPR_
TargetP:	Cytoplasm (Class 5 C0.029; M0.630; S0.014; _0.639)
Predotar:
Subcel. Location:
TM-HMM prediction:	2 TMs
Aramemnon:
TAT position:
Length	1614 aa (-cTP 1541)
Molecular Weight	176.30 kDA(-cTP )
PI	8.60(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1347	Detail								leaf [A. thaliana]	total tissue (5 day HL)	wild-type (rep. 3)
1348	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 1)
1350	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 3)
1395	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1396	Detail								leaf [A. thaliana]	total leaf tissue	clpt1xclpt2 (rep. 2)
1421	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1422	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 2)
1423	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 3)
1425	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 2)
1426	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 3)
1440	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 2)
1441	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 3)
1442	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 1)
1443	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 2)
1444	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 3)
1532	Detail								leaf [A. thaliana]	total leaf tissue - 0 uM CAP	clps (rep. 1)
1534	Detail								leaf [A. thaliana]	total leaf tissue - 40 uM CAP	clps (rep. 1)
1766	Detail								leaf [A. thaliana]	Thylakoids thylakoid membrane	Met1-1
1938	Detail								leaf [A. thaliana]	chloroplast	Prep1_Prep2
2009	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
2010	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2011	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2013	Detail								leaf [A. thaliana]	total leaf tissue	wt
2014	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2017	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
2018	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2019	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2249	Detail								seedlings [A. thaliana]	total tissue	gfs9
2251	Detail								seedlings [A. thaliana]	total tissue	wild-type
2253	Detail								seedlings [A. thaliana]	total tissue	atg5
2287	Detail								[A. thaliana]		Clp C1 WT
2290	Detail								[A. thaliana]		Clp C1 TRAP
2297	Detail								[A. thaliana]		Clp C1 WT
2320	Detail								[A. thaliana]	Thylakoids plastoglobule
2321	Detail								leaf [A. thaliana]
2325	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane	abc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
19546170(mature pollen grains)
19334764(plasma membrane (cell culture))
19114538(guard cells Arabidopsis leaf)
22060019(phosphoproteome - N-starved seedlings)
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data