PPDB

The Plant Proteome Database

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AT3G50330.1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Lab Annot.
Mapman: 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G67060.1 11Arabidopsis thaliana7E-6225259650 (0)_
AT5G67060.2 11Arabidopsis thaliana8E-5724059650 (0)_
AT4G00120.1 11Arabidopsis thaliana9E-399666810 (0)_
Os08g36740.1 7Oryza sativa3E-429784900 (0)_
Os09g28210.1 7Oryza sativa1E-408988940 (0)_
Os01g51140.1 7Oryza sativa1E-369266820 (0)_
Zm00001eb174240_P001 agpv5Zea mays3E-469375900 (0)C
GRMZM5G817854_P01 3.21Zea mays3E-469375900 (0)C
v1_GRMZM2G315455_P01 4a53Zea mays4E-469375900 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: HLH(1)
TargetP: Cytoplasm (Class 2 C0.258; M0.031; S0.039; _0.862)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 231 aa (-cTP 144)
Molecular Weight 25.68 kDA(-cTP )
PI 9.51(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help