PPDB

 The Plant Proteome Database

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AT3G50220.1   IRREGULAR XYLEM protein (DUF579)
Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G67210.1 11Arabidopsis thaliana032684880 (0)_
AT2G15440.1 11Arabidopsis thaliana8E-7723649690 (0)_
AT1G71690.1 11Arabidopsis thaliana4E-5429337540 (0)S
Os06g47310.1 7Oryza sativa1E-8132544586 (6)_
Os04g55640.1 7Oryza sativa9E-7224446634 (4)M
Os02g06380.1 7Oryza sativa1E-7023450640 (0)C
Zm00001eb225830_P001 agpv5Zea mays3E-8332244580 (0)_
v1_GRMZM2G026881_P01 4a53Zea mays3E-8332244580 (0)_
GRMZM2G026881_P01 3.21Zea mays3E-8332244580 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Polysacc_synt_4(1)
TargetP: Cytoplasm (Class 4 C0.005; M0.430; S0.005; _0.646)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 2 TMs
TAT position:
Length 322 aa (-cTP 273)
Molecular Weight 35.81 kDA(-cTP )
PI 6.86(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help