PPDB

The Plant Proteome Database

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AT3G50210.1   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

Lab Annot.
Mapman: 16.8.4 secondary metabolism.flavonoids.flavonols
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G50210.4 11Arabidopsis thaliana03321001000 (0)_
AT3G50210.3 11Arabidopsis thaliana03321001001 (1)_
AT3G49630.1 11Arabidopsis thaliana033179870 (0)S
Os09g07020.1 7Oryza sativa1E-15633263770 (0)M
Os09g07020.2 7Oryza sativa2E-15433262760 (0)M
Os09g07450.1 7Oryza sativa4E-67220526613 (13)_
Zm00001eb226150_P002 agpv5Zea mays2E-15933264780 (0)_
v1_GRMZM2G414387_P01 4a53Zea mays2E-15933264780 (0)_
v1_GRMZM2G414387_P06 4a53Zea mays2E-15933264780 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: 2OG-FeII_Oxy(1) DIOX_N(1)
TargetP: Cytoplasm (Class 4 C0.039; M0.088; S0.398; _0.796)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 332 aa (-cTP 297)
Molecular Weight 37.22 kDA(-cTP )
PI 5.16(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2006Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help