PPDB

The Plant Proteome Database

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AT3G50130.1   transmembrane protein%2C putative (DUF247)

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G50140.1 11Arabidopsis thaliana050577880 (0)C
AT3G50120.1 11Arabidopsis thaliana052769790 (0)S
AT3G50170.1 11Arabidopsis thaliana053367760 (0)_
Os04g42650.1 7Oryza sativa1E-17948556720 (0)_
Os11g34090.1 7Oryza sativa1E-7349632500 (0)_
Os12g29650.1 7Oryza sativa5E-7248333490 (0)_
AC226227.2_FGP005 3.21Zea mays048856700 (0)_
Zm00001eb426130_P001 agpv5Zea mays048856700 (0)_
v1_AC226227.2_FGP005 4a53Zea mays048856700 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF247(1) OppC_N(1)
TargetP: Chloroplast (Class 1 C0.936; M0.045; S0.005; _0.115)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 564 aa (-cTP 469)
Molecular Weight 66.60 kDA(-cTP 55.57)
PI 9.38(-cTP 7.71)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help