PPDB

PPDB	The Plant Proteome Database

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AT3G50080.1 VIER F-box protein 2

Lab Annot.

VIER F-box proteine 2
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G67250.1 11 Arabidopsis thaliana 0 532 70 81 0 (0) _
AT4G07400.1 11 Arabidopsis thaliana 1E-169 508 52 68 1 (1) _
AT1G47056.1 11 Arabidopsis thaliana 6E-168 522 50 67 0 (0) C
Os04g42670.1 7 Oryza sativa 3E-119 446 46 63 0 (0) C
Os03g45910.1 7 Oryza sativa 3E-22 136 42 58 0 (0) _
Os11g42160.1 7 Oryza sativa 3E-17 367 29 42 0 (0) _
Zm00001eb307130_P001 agpv5 Zea mays 4E-121 423 50 68 0 (0) M
GRMZM2G067460_P01 3.21 Zea mays 6E-121 423 50 68 0 (0) C
v1_GRMZM2G067460_P01 4a53 Zea mays 6E-121 423 50 68 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	F-box(3) F-box-like(1) F-box_5(1) LRR_4(5) LRR_5(2) LRR_6(6) NADH_4Fe-4S(1)
TargetP:	Cytoplasm (Class 3 C0.292; M0.066; S0.088; _0.817)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	522 aa (-cTP 516)
Molecular Weight	57.25 kDA(-cTP )
PI	8.68(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)
21166475(cytosolic-fractions-crude)

Comparative Proteomics Data