PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G49900.1   Phototropic-responsive NPH3 family protein
Lab Annot.
Mapman: 35.1.9 not assigned.no ontology.BTB/POZ domain-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G49900.2 11Arabidopsis thaliana052099990 (0)_
AT5G13600.1 11Arabidopsis thaliana5E-2020634490 (0)_
AT5G66560.3 11Arabidopsis thaliana2E-1626129460 (0)M
Os07g39850.1 7Oryza sativa1E-4455327430 (0)_
Os03g10880.1 7Oryza sativa9E-1917636515 (5)_
Os12g41910.1 7Oryza sativa3E-1716938500 (0)_
GRMZM2G180490_P01 3.21Zea mays3E-4936635540 (0)_
Zm00001eb326040_P001 agpv5Zea mays3E-4735835530 (0)_
Zm00001eb326040_P002 agpv5Zea mays3E-3215743660 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Cep57_CLD(1) DUF3342(2) NPH3(2)
TargetP: Cytoplasm (Class 4 C0.412; M0.044; S0.007; _0.728)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 517 aa (-cTP 469)
Molecular Weight 57.95 kDA(-cTP )
PI 6.77(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help