PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G49850.1   telomere repeat binding factor 3

Lab Annot.
Mapman: 27.3.26 RNA.regulation of transcription.MYB-related transcription factor family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G49850.2 11Arabidopsis thaliana02951001000 (0)_
AT5G67580.1 11Arabidopsis thaliana6E-10429866770 (0)_
AT5G67580.2 11Arabidopsis thaliana6E-10429866770 (0)_
Os12g41920.3 7Oryza sativa1E-4723441570 (0)_
Os12g41920.2 7Oryza sativa1E-4723441570 (0)_
Os12g41920.1 7Oryza sativa1E-4723441570 (0)_
Zm00001eb357490_P002 agpv5Zea mays5E-4624743560 (0)_
GRMZM2G136887_P02 3.21Zea mays6E-4624743560 (0)_
v1_GRMZM2G136887_P01 4a53Zea mays6E-4624743563 (3)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CHDCT2(2) Linker_histone(1) Myb_DNA-bind_6(1) Myb_DNA-binding(1)
TargetP: Cytoplasm (Class 3 C0.223; M0.118; S0.028; _0.797)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 295 aa (-cTP 238)
Molecular Weight 32.25 kDA(-cTP )
PI 9.52(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help