PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT3G49740.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G02010.1 11 Arabidopsis thaliana 1E-113 698 30 54 0 (0) M
AT4G32430.1 11 Arabidopsis thaliana 3E-106 695 32 51 0 (0) M
AT4G13650.1 11 Arabidopsis thaliana 2E-105 721 30 51 1 (1) _
Os12g36620.1 7 Oryza sativa 2E-116 718 31 52 0 (0) _
Os05g49920.1 7 Oryza sativa 6E-112 620 35 55 0 (0) C
Os08g25280.1 7 Oryza sativa 2E-108 714 30 51 0 (0) M
v1_GRMZM2G153275_P01 4a53 Zea mays 4E-108 718 30 51 0 (0) _
v1_GRMZM2G153275_P02 4a53 Zea mays 4E-108 718 30 51 0 (0) _
GRMZM2G153275_P01 3.21 Zea mays 4E-108 718 30 51 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ATP13(3) Clathrin(3) DNAPolymera_Pol(1) PPR(16) PPR_1(12) PPR_2(14) PPR_3(8) PPR
TargetP:	Chloroplast (Class 4 C0.432; M0.058; S0.109; _0.162)
Predotar:
Subcel. Location:	Lumen
TM-HMM prediction:	No
Aramemnon:	1 TMs
TAT position:
Length	737 aa (-cTP 704) (-lTP 674)
Molecular Weight	82.01 kDA(-cTP 78.37)(-lTP 75.02)
PI	5.96(-cTP 5.79)(-lTP 5.700)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data