PPDB

PPDB	The Plant Proteome Database

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AT3G49710.1 Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.

Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G22070.1 11 Arabidopsis thaliana 6E-172 776 39 56 0 (0) _
AT1G68930.1 11 Arabidopsis thaliana 3E-160 726 36 55 0 (0) M
AT1G68930.2 11 Arabidopsis thaliana 3E-160 724 36 55 0 (0) _
Os02g01610.1 7 Oryza sativa 3E-171 728 37 57 0 (0) _
Os02g01610.2 7 Oryza sativa 3E-171 728 37 57 0 (0) _
Os09g07780.1 7 Oryza sativa 3E-164 653 41 58 0 (0) M
Zm00001eb254360_P003 agpv5 Zea mays 1E-166 742 36 56 0 (0) C
Zm00001eb254360_P002 agpv5 Zea mays 1E-166 742 36 56 0 (0) C
Zm00001eb254360_P001 agpv5 Zea mays 1E-166 742 36 56 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DYW_deaminase(1) PPR(13) PPR_1(10) PPR_2(10) PPR_3(9) PPR_long(4) TPR_14(4) TPR_
TargetP:	Cytoplasm (Class 4 C0.014; M0.348; S0.083; _0.744)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	721 aa (-cTP 639)
Molecular Weight	81.34 kDA(-cTP )
PI	8.46(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data