PPDB

PPDB	The Plant Proteome Database

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AT3G49660.1 Transducin/WD40 repeat-like superfamily protein

Lab Annot.

Mapman: 33.99 development.unspecified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G02730.1 11 Arabidopsis thaliana 2E-132 307 58 77 0 (0) _
AT5G64730.1 11 Arabidopsis thaliana 2E-43 309 28 49 0 (0) _
AT2G43770.1 11 Arabidopsis thaliana 3E-42 298 31 52 4 (2) C
Os03g51550.1 7 Oryza sativa 3E-157 315 65 80 2 (2) C
Os03g51550.2 7 Oryza sativa 3E-157 315 65 80 2 (2) C
Os03g51550.3 7 Oryza sativa 3E-157 315 65 80 2 (2) C
Zm00001eb055840_P001 agpv5 Zea mays 3E-158 323 64 80 0 (0) C
GRMZM2G088162_P01 3.21 Zea mays 3E-158 323 64 80 0 (0) C
v1_GRMZM2G088162_P01 4a53 Zea mays 3E-158 323 64 80 12 (12) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ANAPC4_WD40(7) DUF1513(3) eIF2A(4) Ge1_WD40(4) Nup160(6) PALB2_WD40(4) VID27(3)
TargetP:	Chloroplast (Class 3 C0.760; M0.137; S0.068; _0.218)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	317 aa (-cTP 276)
Molecular Weight	34.82 kDA(-cTP 30.44)
PI	6.06(-cTP 5.91)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)

Comparative Proteomics Data