PPDB

The Plant Proteome Database

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AT3G49590.3   Autophagy-related protein 13

Lab Annot. ATG13a - (ATG1/13 kinase complex)
Mapman: 29.5.2 protein.degradation.autophagy
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links PeptideAtlas   POGS   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G49590.2 11Arabidopsis thaliana061896970 (0)_
AT3G49590.1 11Arabidopsis thaliana061896970 (0)_
AT3G18770.1 11Arabidopsis thaliana2E-098846610 (0)C
Os04g45570.2 7Oryza sativa2E-5461230430 (0)_
Os04g45570.1 7Oryza sativa1E-5361230430 (0)_
Os02g43040.1 7Oryza sativa1E-5147637480 (0)_
Zm00001eb248750_P001 agpv5Zea mays2E-5161633440 (0)C
v1_GRMZM2G109348_P01 4a53Zea mays2E-5161633440 (0)C
GRMZM2G109348_P01 3.21Zea mays2E-5161633440 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ATG13(1)
TargetP: Cytoplasm (Class 4 C0.427; M0.079; S0.018; _0.634)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 618 aa (-cTP 555)
Molecular Weight 68.46 kDA(-cTP )
PI 9.04(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help