PPDB

PPDB	The Plant Proteome Database

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AT3G49400.1 Transducin/WD40 repeat-like superfamily protein

Lab Annot.

Transducin/WD40 repeat-like protein
Mapman: 27.3.24 RNA.regulation of transcription.MADS box transcription factor family

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G49400.2 11 Arabidopsis thaliana 0 892 97 97 1 (1) _
AT3G49400.3 11 Arabidopsis thaliana 0 756 100 100 0 (0) _
AT3G49400.4 11 Arabidopsis thaliana 0 542 100 100 0 (0) _
Os01g50690.1 7 Oryza sativa 1E-127 671 37 52 0 (0) C
Zm00001eb211870_P002 agpv5 Zea mays 0 929 38 54 0 (0) _
Zm00001eb062490_P003 agpv5 Zea mays 0 923 37 54 0 (0) S
Zm00001eb062490_P002 agpv5 Zea mays 2E-133 788 36 52 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ANAPC4_WD40(3) TFIIIC_delta(3) TRCF(1) WD40(4) zf-TFIIIC(2)
TargetP:	Cytoplasm (Class 4 C0.121; M0.121; S0.102; _0.338)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	892 aa (-cTP 885)
Molecular Weight	99.72 kDA(-cTP )
PI	6.23(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1763	Detail								leaf [A. thaliana]	total leaf tissue	DXS_Flag

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)

Comparative Proteomics Data