PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G49250.1   defective in meristem silencing 3

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G24280.3 11Arabidopsis thaliana1E-3826836530 (0)_
AT5G24280.2 11Arabidopsis thaliana1E-3826836530 (0)_
AT5G24280.1 11Arabidopsis thaliana2E-3826836532 (2)_
Os01g13404.1 7Oryza sativa2E-10836346670 (0)_
Os01g13404.3 7Oryza sativa1E-9529249690 (0)_
Os01g13404.2 7Oryza sativa5E-9128548690 (0)_
v1_GRMZM2G309152_P02 4a53Zea mays5E-10637145640 (0)_
v1_GRMZM2G309152_P01 4a53Zea mays5E-10637145640 (0)_
GRMZM2G309152_P02 3.21Zea mays5E-10637145640 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: APG6_N(2) Baculo_gp64(2) DUF5346(1) DUF724(2) Fib_alpha(2) XhlA(2)
TargetP: Cytoplasm (Class 5 C0.239; M0.361; S0.033; _0.558)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 420 aa (-cTP 388)
Molecular Weight 46.77 kDA(-cTP )
PI 6.77(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help