PPDB

 The Plant Proteome Database

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AT3G49220.1   Plant invertase/pectin methylesterase inhibitor superfamily
Lab Annot.
Mapman: 10.8.1 cell wall.pectin*esterases.PME
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G49220.3 11Arabidopsis thaliana05981001000 (0)_
AT5G53370.1 11Arabidopsis thaliana060264793 (0)_
AT5G53370.2 11Arabidopsis thaliana060264790 (0)_
Os01g13320.1 7Oryza sativa055449670 (0)_
Os02g18650.1 7Oryza sativa1E-17644356720 (0)S
Os07g47830.1 7Oryza sativa1E-15252945610 (0)S
Zm00001eb236930_P001 agpv5Zea mays8E-15647651660 (0)S
GRMZM2G008593_P01 3.21Zea mays8E-15647651661 (1)S
v1_GRMZM2G008593_P01 4a53Zea mays8E-15647651660 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Pectinesterase(1) PMEI(1)
TargetP: Chloroplast (Class 5 C0.540; M0.046; S0.002; _0.370)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 598 aa (-cTP 540)
Molecular Weight 65.31 kDA(-cTP 59.21)
PI 8.79(-cTP 8.46)

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

 22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help