PPDB

PPDB	The Plant Proteome Database

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AT3G49170.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

embryo defective 2261 (EMB2261) TPR
Mapman: 26.33* misc. tetratricopeptide repeat (TPR)

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G57430.1 11 Arabidopsis thaliana 0 828 36 58 0 (0) C
AT2G27610.1 11 Arabidopsis thaliana 4E-180 796 37 58 3 (3) M
AT4G13650.1 11 Arabidopsis thaliana 3E-179 797 35 57 1 (1) _
Os05g12130.1 7 Oryza sativa 0 778 49 68 0 (0) C
Os09g07780.1 7 Oryza sativa 0 821 38 57 0 (0) M
Os01g25270.1 7 Oryza sativa 0 821 38 57 0 (0) M
Zm00001eb083880_P001 agpv5 Zea mays 0 789 37 59 0 (0) S
GRMZM2G056996_P01 3.21 Zea mays 0 789 37 59 0 (0) _
v1_GRMZM2G056996_P01 4a53 Zea mays 0 789 37 59 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ABC_trans_N(1) Clathrin(3) Coatomer_E(2) DYW_deaminase(1) PPR(17) PPR_1(16) PPR_
TargetP:	Chloroplast (Class 2 C0.868; M0.075; S0.036; _0.091)
Predotar:
Subcel. Location:	Lumen
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	850 aa (-cTP 800) (-lTP 734)
Molecular Weight	95.49 kDA(-cTP 90.14)(-lTP 82.78)
PI	6.37(-cTP 6.14)(-lTP 5.979)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data