PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G49150.1   F-box/FBD/LRR protein

Lab Annot. F-box/RNI-like protein
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G59240.1 11Arabidopsis thaliana2E-17247257700 (0)_
AT3G59250.1 11Arabidopsis thaliana7E-14046851630 (0)_
AT4G14096.2 11Arabidopsis thaliana2E-12646249650 (0)_
Os01g52980.1 7Oryza sativa9E-1421430500 (0)C
Os09g37570.1 7Oryza sativa5E-1131127420 (0)_
Os10g03870.1 7Oryza sativa9E-1137724420 (0)_
GRMZM2G133021_P01 3.21Zea mays4E-1119428480 (0)_
v1_GRMZM2G133021_P01 4a53Zea mays4E-1119428480 (0)_
Zm00001eb288120_P001 agpv5Zea mays4E-1119428480 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: F-box(1) F-box-like(2) FBD(1) LRR_2(2) LRR_4(2)
TargetP: Cytoplasm (Class 2 C0.053; M0.089; S0.208; _0.824)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 467 aa (-cTP 401)
Molecular Weight 53.32 kDA(-cTP )
PI 4.75(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help