PPDB

The Plant Proteome Database

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AT3G49100.1   Signal recognition particle%2C SRP9/SRP14 subunit

Lab Annot. signal recognition particle 9 kDa protein, putative / SRP9, putative
Mapman: 29.3.4.99 protein.targeting.secretory pathway.unspecified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G49100.2 11Arabidopsis thaliana4E-741031001000 (0)_
Os06g14550.1 7Oryza sativa2E-5610375875 (5)_
Zm00001eb281280_P001 agpv5Zea mays1E-6110382920 (0)C
GRMZM2G046576_P01 3.21Zea mays1E-61103829215 (13)C
v1_GRMZM2G046576_P01 4a53Zea mays1E-61103829215 (15)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Me-amine-dh_L(1) SRP9-21(1)
TargetP: Cytoplasm (Class 3 C0.094; M0.164; S0.117; _0.721)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 103 aa (-cTP 84)
Molecular Weight 12.02 kDA(-cTP )
PI 9.12(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
325Detail       BY2 cell suspension [Tobacco] cell wall enriched wild-type
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1532Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP clps (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help