PPDB

The Plant Proteome Database

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AT3G49080.1   Ribosomal protein S5 domain 2-like superfamily protein

Lab Annot.
Mapman: 29.2.1.99.1.9 protein.synthesis.ribosomal protein.unknown.small subunit.S9
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G74970.1 11Arabidopsis thaliana9E-231264557549 (457)C
Os07g46440.1 7Oryza sativa1E-10921275874 (4)M
Os03g55930.1 7Oryza sativa8E-19129415535 (35)C
Zm00001eb329680_P001 agpv5Zea mays3E-10722572830 (0)M
GRMZM6G832911_P01 3.21Zea mays6E-7115271800 (0)_
Zm00001eb058750_P001 agpv5Zea mays1E-1813043560 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Flg_hook(2) Ribosomal_S9(1)
TargetP: Mitochondria (Class 3 C0.149; M0.605; S0.064; _0.006)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 430 aa (-cTP 393)
Molecular Weight 47.99 kDA(-cTP )
PI 5.64(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1757Detail       leaf [A. thaliana] total leaf tissue DXS_Flag

* For details about the exprimental sources click here.

Published Proteomics Data

19334764(plasma membrane (cell culture))
21841088(mitochondria (2DE native gel))
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help