PPDB

PPDB	The Plant Proteome Database

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AT3G48960.1 Ribosomal protein L13e family protein

Lab Annot.

Mapman: 29.2.1.2.2.13 protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L13

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G49010.2 11 Arabidopsis thaliana 1E-116 191 84 89 365 (276) _
AT3G49010.1 11 Arabidopsis thaliana 1E-116 191 84 89 365 (276) _
AT3G49010.7 11 Arabidopsis thaliana 1E-116 191 84 89 0 (0) _
Os06g02510.3 7 Oryza sativa 6E-106 197 75 83 39 (39) _
Os06g02510.1 7 Oryza sativa 6E-106 197 75 83 39 (39) _
Os06g02510.2 7 Oryza sativa 6E-106 197 75 83 39 (39) _
v1_GRMZM2G081102_P03 4a53 Zea mays 5E-111 207 75 84 103 (101) _
v1_GRMZM2G081102_P01 4a53 Zea mays 5E-111 207 75 84 103 (101) _
Zm00001eb143000_P002 agpv5 Zea mays 5E-111 207 75 84 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Ribosomal_L13e(1)
TargetP:	Cytoplasm (Class 3 C0.391; M0.050; S0.009; _0.797)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	206 aa (-cTP 148)
Molecular Weight	23.50 kDA(-cTP )
PI	10.55(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

17934214(cytosolic ribosome)
18814325(cotyledons)
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19888209(80S polysomal fraction)
19888209(leaves)

Comparative Proteomics Data