PPDB

PPDB	The Plant Proteome Database

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AT3G48900.1 single-stranded DNA endonuclease family protein

Lab Annot.

Mapman: 28.1 DNA.synthesis/chromatin structure

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G48900.3 11 Arabidopsis thaliana 0 542 98 98 0 (0) S
AT3G48900.2 11 Arabidopsis thaliana 0 505 99 100 0 (0) _
AT3G28030.4 11 Arabidopsis thaliana 3E-26 302 31 49 0 (0) _
Os08g01130.1 7 Oryza sativa 8E-118 365 50 67 0 (0) _
Os09g35000.1 7 Oryza sativa 2E-16 134 37 55 0 (0) _
Os03g10780.1 7 Oryza sativa 2E-13 124 36 51 0 (0) _
GRMZM2G021674_P01 3.21 Zea mays 1E-116 366 50 68 0 (0) _
Zm00001eb259890_P001 agpv5 Zea mays 1E-116 366 50 68 0 (0) _
v1_GRMZM2G021674_P01 4a53 Zea mays 1E-116 366 50 68 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Chromo(1) Chromo_2(1) Chromo_shadow(1) DC_STAMP(1) XPG_I(2)
TargetP:	Secreted (Class 1 C0.002; M0.050; S0.972; _0.043)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:
TAT position:
Length	536 aa (-cTP 532)
Molecular Weight	60.80 kDA(-cTP )
PI	5.58(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data