PPDB

 The Plant Proteome Database

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AT3G48880.1   RNI-like superfamily protein
Lab Annot. RNI-like protein
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G48880.2 11Arabidopsis thaliana03091001000 (0)_
AT3G48880.3 11Arabidopsis thaliana03091001000 (0)_
AT4G11580.1 11Arabidopsis thaliana8E-3031226460 (0)_
Os10g35920.1 7Oryza sativa3E-10729948730 (0)_
Os12g41630.1 7Oryza sativa3E-2022626420 (0)_
Os03g43770.1 7Oryza sativa8E-1417829440 (0)_
Zm00001eb044180_P004 agpv5Zea mays2E-10529949710 (0)_
Zm00001eb044180_P001 agpv5Zea mays2E-10529949710 (0)_
GRMZM5G868683_P03 3.21Zea mays9E-10529949710 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: F-box(2) F-box-like(2) LRR_4(2) LRR_8(1)
TargetP: Cytoplasm (Class 3 C0.070; M0.343; S0.013; _0.911)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 309 aa (-cTP 286)
Molecular Weight 36.06 kDA(-cTP )
PI 8.79(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help