PPDB

PPDB	The Plant Proteome Database

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AT3G48860.1 coiled-coil protein

Lab Annot.

unknown protein
Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G48860.2 11 Arabidopsis thaliana 0 481 99 99 0 (0) M
AT3G48860.3 11 Arabidopsis thaliana 0 327 99 99 0 (0) C
AT5G23700.2 11 Arabidopsis thaliana 0 478 70 78 0 (0) M
Os01g70320.1 7 Oryza sativa 1E-141 495 55 69 5 (5) C
Os11g31950.1 7 Oryza sativa 2E-86 351 45 64 0 (0) M
Os05g05580.1 7 Oryza sativa 3E-43 361 35 51 0 (0) M
Zm00001eb142490_P001 agpv5 Zea mays 4E-136 495 54 69 0 (0) C
v1_GRMZM2G126266_P02 4a53 Zea mays 4E-136 495 54 69 0 (0) C
GRMZM2G126266_P02 3.21 Zea mays 4E-136 495 54 69 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	APG6_N(2) DMPK_coil(3) DUF5320(2) DUF724(1) DUF730(2) EMP24_GP25L(2) ERM(1) Fez1
TargetP:	Mitochondria (Class 4 C0.273; M0.635; S0.003; _0.230)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	494 aa (-cTP 441)
Molecular Weight	54.09 kDA(-cTP )
PI	8.63(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
19376835(leaf phosphoproteins)
22060019(phosphoproteome - N-starved seedlings)
21166475(cytosolic-fractions-crude)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data