PPDB

The Plant Proteome Database

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AT3G48780.1   serine palmitoyltransferase 1

Lab Annot. serine palmitoyltransferase LCB2a and LCB2b
Mapman: 11.8.1.2 lipid metabolism.exotics (steroids, squalene etc).sphingolipids.serine C-palmitoyltransferase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G48780.2 11Arabidopsis thaliana04891001000 (0)S
AT5G23670.1 11Arabidopsis thaliana048991950 (0)S
AT5G23670.2 11Arabidopsis thaliana048991950 (0)S
Os01g70380.1 7Oryza sativa048479900 (0)S
Os11g31640.1 7Oryza sativa047879900 (0)S
Os01g70370.1 7Oryza sativa048675860 (0)S
GRMZM2G010202_P01 3.21Zea mays048977880 (0)S
Zm00001eb363730_P001 agpv5Zea mays048977880 (0)S
v1_GRMZM2G010202_P01 4a53Zea mays048977880 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Aminotran_1_2(1) Aminotran_5(1) Beta_elim_lyase(1) Cys_Met_Meta_PP(1) DegT_DnrJ_
TargetP: Secreted (Class 3 C0.005; M0.169; S0.736; _0.215)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 489 aa (-cTP 483)
Molecular Weight 53.86 kDA(-cTP )
PI 8.73(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help