PPDB

The Plant Proteome Database

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AT3G48670.1   XH/XS domain-containing protein

Lab Annot. XH/XS domain-containing protein / XS zinc finger domain-containing protein
Mapman: 27.3.67 RNA.regulation of transcription.putative transcription regulator
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G48670.3 11Arabidopsis thaliana06471001000 (0)_
AT3G48670.2 11Arabidopsis thaliana06471001005 (5)_
AT3G12550.1 11Arabidopsis thaliana063354710 (0)_
Os01g44230.1 7Oryza sativa1E-16763941651 (1)_
Os01g03570.1 7Oryza sativa1E-14357141640 (0)M
Os02g19130.1 7Oryza sativa7E-14263938600 (0)_
GRMZM2G160032_P01 3.21Zea mays4E-16164243630 (0)_
GRMZM2G160032_P04 3.21Zea mays4E-16164243630 (0)_
Zm00001eb159040_P002 agpv5Zea mays4E-16164243630 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Flp_C(2) XH(1) XS(1) zf-XS(1)
TargetP: Cytoplasm (Class 1 C0.089; M0.108; S0.036; _0.936)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 647 aa (-cTP 568)
Molecular Weight 74.82 kDA(-cTP )
PI 5.64(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
351Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
544Detail       leaf [A. thaliana] stroma (FPLC) <600 kDa (LMA) wild-type
1409Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 wild-type
1485Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 3)
1530Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP wild-type (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

17075075(Cd2+-response proteins root)
20706207(contaminants cell cycle interactome (cell culture))
21166475(cytosolic-fractions-crude)
21173025(root proteome)
20813957(SUMO proteome)

Comparative Proteomics Data


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