PPDB

PPDB	The Plant Proteome Database

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AT3G48590.1 nuclear factor Y%2C subunit C1

Lab Annot.

HAP5A (Heme activator protein (yeast) homolog 5A); DNA binding / transcription factor
Mapman: 27.3.16 RNA.regulation of transcription.CCAAT box binding factor family, HAP5

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G63470.1 11 Arabidopsis thaliana 2E-126 232 86 89 12 (12) _
AT5G63470.2 11 Arabidopsis thaliana 2E-126 232 86 89 12 (12) _
AT1G54830.2 11 Arabidopsis thaliana 3E-68 159 67 77 13 (13) _
Os03g14669.2 7 Oryza sativa 5E-66 191 62 69 4 (4) _
Os03g14669.1 7 Oryza sativa 5E-66 191 62 69 4 (4) _
Os02g07450.1 7 Oryza sativa 1E-64 148 71 78 0 (0) _
Zm00001eb010770_P002 agpv5 Zea mays 1E-67 193 64 72 0 (0) _
GRMZM2G089812_P02 3.21 Zea mays 1E-67 193 64 72 7 (6) _
GRMZM2G089812_P01 3.21 Zea mays 1E-67 193 64 72 7 (6) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CBFD_NFYB_HMF(1) CENP-W(1) CENP-X(1) DUF1161(1) Histone(1)
TargetP:	Cytoplasm (Class 5 C0.528; M0.078; S0.054; _0.700)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	234 aa (-cTP 209)
Molecular Weight	25.33 kDA(-cTP )
PI	5.03(-cTP )

Experimental Evidence

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View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
371	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
528	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt2)
2182	Detail								Rosettes [A. thaliana]	total soluble	tic40 and wt
2183	Detail								Rosettes [A. thaliana]	total soluble	tic40 and wt
2184	Detail								Rosettes [A. thaliana]	total soluble	tic40 and wt
2185	Detail								Rosettes [A. thaliana]	total soluble	tic40 and wt

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data