PPDB

 The Plant Proteome Database

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AT3G48570.1   secE/sec61-gamma protein transport protein
Lab Annot. secE/sec61-gamma protein transport protein
Mapman: 29.3.4.99 protein.targeting.secretory pathway.unspecified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G50460.1 11Arabidopsis thaliana5E-4069869714 (14)_
AT4G24920.1 11Arabidopsis thaliana5E-4069869714 (14)_
Os02g08180.1 7Oryza sativa6E-396985948 (8)_
Os06g44374.1 7Oryza sativa8E-396985958 (8)_
Os03g31340.1 7Oryza sativa1E-123669860 (0)_
AC208023.3_FGP001 3.21Zea mays9E-4069889438 (38)_
GRMZM2G089491_P01 3.21Zea mays2E-3969869425 (25)_
Zm00001eb274950_P001 agpv5Zea mays2E-396986940 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: SecE(1)
TargetP: Cytoplasm (Class 1 C0.063; M0.070; S0.122; _0.948)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 69 aa (-cTP 30)
Molecular Weight 7.68 kDA(-cTP )
PI 9.85(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1357Detail       leaf [A. thaliana] total tissue - low mass region clpt1xclpt2
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1

* For details about the exprimental sources click here.

Published Proteomics Data

 17644812(plasma membrane - suspension cells)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help