PPDB

The Plant Proteome Database

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AT3G48530.1   SNF1-related protein kinase regulatory subunit gamma 1

Lab Annot. KING1 (SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT GAMMA 1)
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G69800.1 11Arabidopsis thaliana3E-61247416327 (19)_
AT1G69800.2 11Arabidopsis thaliana8E-61247416320 (14)M
AT1G69800.3 11Arabidopsis thaliana2E-4717345690 (0)_
Os04g31340.1 7Oryza sativa6E-17942059760 (0)_
Os01g69240.1 7Oryza sativa4E-15741552720 (0)_
Os01g40420.1 7Oryza sativa2E-5725436640 (0)_
v1_GRMZM2G173536_P01 4a53Zea mays041960760 (0)_
v1_GRMZM2G173536_P03 4a53Zea mays041960760 (0)_
Zm00001eb085680_P001 agpv5Zea mays041960760 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CBS(4)
TargetP: Cytoplasm (Class 4 C0.395; M0.077; S0.049; _0.651)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 424 aa (-cTP 413)
Molecular Weight 47.42 kDA(-cTP )
PI 5.15(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1547Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3
2245Detail       seedlings [A. thaliana] total tissue wild-type
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

17526915(glycoproteome cell wall (stems))
18463617(suspension cells-phosphorylated proteins)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19525416(leaf (wt and clpr4-1 mutant))
19253305(phosphoproteins (etiolated seedling))
19376835(leaf phosphoproteins)
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


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