PPDB

The Plant Proteome Database

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AT3G48460.1   GDSL-like Lipase/Acylhydrolase superfamily protein

Lab Annot. GDSL-motif lipase/hydrolase protein
Mapman: 26.28 misc.GDSL-motif lipase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G28650.1 11Arabidopsis thaliana1E-7636937530 (0)S
AT1G28640.1 11Arabidopsis thaliana2E-7538036540 (0)S
AT1G28600.1 11Arabidopsis thaliana1E-73372375321 (14)S
Os03g62740.1 7Oryza sativa1E-13834854700 (0)S
Os05g11970.1 7Oryza sativa8E-8038935540 (0)S
Os01g11710.1 7Oryza sativa9E-7634539540 (0)S
v1_GRMZM2G369815_P01 4a53Zea mays2E-126349537110 (10)S
GRMZM2G369815_P01 3.21Zea mays2E-12634953718 (8)S
Zm00001eb064230_P001 agpv5Zea mays2E-12634953710 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Lipase_GDSL(1) Lipase_GDSL_2(1)
TargetP: Secreted (Class 2 C0.182; M0.010; S0.902; _0.073)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 381 aa (-cTP 312)
Molecular Weight 42.23 kDA(-cTP )
PI 7.61(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)

* For details about the exprimental sources click here.

Published Proteomics Data

20118269(developing seeds)
18796151(cell wall (hypocotyl))
WallDB-E.Jamet(cell wall reference proteome)
21109274(cellwall-glycoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help