PPDB

PPDB	The Plant Proteome Database

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AT3G48430.1 relative of early flowering 6

Lab Annot.

REF6 (RELATIVE OF EARLY FLOWERING 6); transcription factor
Mapman: 27.3.57 RNA.regulation of transcription.JUMONJI family

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G48430.2 11 Arabidopsis thaliana 0 1001 100 100 0 (0) M
AT5G04240.1 11 Arabidopsis thaliana 5E-136 627 42 55 1 (1) _
AT5G46910.2 11 Arabidopsis thaliana 1E-70 510 35 48 0 (0) _
Os12g18150.1 7 Oryza sativa 0 969 42 56 0 (0) _
Os01g67970.1 7 Oryza sativa 0 588 53 67 0 (0) _
Os03g05680.1 7 Oryza sativa 2E-90 323 45 64 0 (0) C
Zm00001eb365340_P001 agpv5 Zea mays 0 676 50 64 0 (0) _
GRMZM2G339379_P01 3.21 Zea mays 0 677 50 64 0 (0) _
v1_GRMZM2G339379_P01 4a53 Zea mays 0 677 50 64 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	JmjC(1) JmjN(1) zf-C2H2(4) zf-C2H2_4(3) zf-C2H2_8(3) zf-H2C2_2(2)
TargetP:	Cytoplasm (Class 3 C0.058; M0.155; S0.162; _0.573)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1360 aa (-cTP 1285)
Molecular Weight	152.63 kDA(-cTP )
PI	7.21(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19376835(leaf phosphoproteins)
19114538(guard cells Arabidopsis leaf)
22060019(phosphoproteome - N-starved seedlings)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data