PPDB

PPDB	The Plant Proteome Database

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AT3G48250.1 Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.

Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G02490.1 11 Arabidopsis thaliana 3E-90 555 31 52 0 (0) M
AT5G15980.1 11 Arabidopsis thaliana 4E-79 588 28 49 0 (0) M
AT1G71060.1 11 Arabidopsis thaliana 2E-31 416 26 46 0 (0) M
Os01g73950.1 7 Oryza sativa 5E-170 538 45 65 0 (0) C
Os01g73950.2 7 Oryza sativa 5E-170 538 45 65 0 (0) C
Os03g06910.1 7 Oryza sativa 3E-33 350 28 45 0 (0) M
Zm00001eb139890_P002 agpv5 Zea mays 4E-158 536 45 63 0 (0) M
Zm00001eb139890_P001 agpv5 Zea mays 4E-158 536 45 63 0 (0) M
v1_GRMZM2G367678_P01 4a53 Zea mays 4E-154 538 43 62 1 (1) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF3368(3) MRP-S27(3) Mtf2(2) PPR(8) PPR_1(7) PPR_2(9) PPR_3(6) PPR_long(5) TPR_
TargetP:	Chloroplast (Class 5 C0.807; M0.764; S0.003; _0.004)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	621 aa (-cTP 554)
Molecular Weight	71.03 kDA(-cTP 63.38)
PI	8.19(-cTP 6.38)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

20706207(contaminants cell cycle interactome (cell culture))
21533090(plasmodesmata-crude)

Comparative Proteomics Data