PPDB

 The Plant Proteome Database

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AT3G48090.1   alpha/beta-Hydrolases superfamily protein
Lab Annot. alpha/beta-Hydrolases
Mapman: 20.1.3 stress.biotic.signalling
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G48090.2 11Arabidopsis thaliana05151001007 (0)M
AT3G48080.1 11Arabidopsis thaliana063272820 (0)_
AT3G52430.1 11Arabidopsis thaliana3E-1530623454 (0)_
Os09g22450.1 7Oryza sativa7E-13460039540 (0)C
Os11g09010.2 7Oryza sativa1E-3747129430 (0)M
Os11g09010.3 7Oryza sativa1E-3747129430 (0)_
Zm00001eb099090_P002 agpv5Zea mays3E-12259837540 (0)C
GRMZM2G045716_P01 3.21Zea mays3E-12259837540 (0)C
v1_GRMZM2G045716_P01 4a53Zea mays3E-12259837540 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Abhydrolase_6(1) EDS1_EP(1) Lipase_3(1) Merozoite_SPAM(1) PatG_D(2) Tricorn_C1(1
TargetP: Cytoplasm (Class 3 C0.065; M0.270; S0.057; _0.813)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 623 aa (-cTP 551)
Molecular Weight 71.69 kDA(-cTP )
PI 5.73(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1350Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 3)
1400Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1439Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 1)
1440Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 2)
1442Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 1)
1444Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
1758Detail       leaf [A. thaliana] total leaf tissue DXS_Flag+fosmidomycin
1875Detail       Total leaf [A. thaliana] total soluble wild-type
2075Detail       Total leaf [A. thaliana] total soluble wt & clpt1xclpt2
2077Detail       Total leaf [A. thaliana] total soluble wt & clpt1xclpt2
2080Detail       Total leaf [A. thaliana] total soluble wt & clpt1xclpt2
2086Detail       Total leaf [A. thaliana] total soluble wt & clpt1xclpt2
2289Detail        [A. thaliana] Clp C1 TRAP
2296Detail        [A. thaliana] Clp C1 WT
2302Detail        [A. thaliana] Clp C1 WT
2306Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

 21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help