PPDB

The Plant Proteome Database

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AT3G48070.1   RING/U-box superfamily protein

Lab Annot. RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G48070.2 11Arabidopsis thaliana03181001000 (0)C
AT3G48070.3 11Arabidopsis thaliana02691001000 (0)_
AT5G62910.1 11Arabidopsis thaliana1E-12033762700 (0)C
Os02g37030.1 7Oryza sativa4E-5136440490 (0)_
Os04g38970.1 7Oryza sativa3E-4333136450 (0)C
Os04g38970.2 7Oryza sativa3E-4333136450 (0)C
Zm00001eb080490_P002 agpv5Zea mays1E-3534034440 (0)C
GRMZM2G029001_P01 3.21Zea mays1E-3534034440 (0)C
v1_GRMZM2G029001_P01 4a53Zea mays1E-3534034440 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: zf-C3HC4_2(1) zf-C3HC4_3(1) zf-RING_2(1) zf-RING_4(1) zf-UDP(1)
TargetP: Chloroplast (Class 2 C0.914; M0.070; S0.013; _0.298)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 319 aa (-cTP 271)
Molecular Weight 35.23 kDA(-cTP 29.89)
PI 5.53(-cTP 4.87)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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