PPDB

PPDB	The Plant Proteome Database

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AT3G48070.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G48070.2 11 Arabidopsis thaliana 0 318 100 100 0 (0) C
AT3G48070.3 11 Arabidopsis thaliana 0 269 100 100 0 (0) _
AT5G62910.1 11 Arabidopsis thaliana 1E-120 337 62 70 0 (0) C
Os02g37030.1 7 Oryza sativa 4E-51 364 40 49 0 (0) _
Os04g38970.1 7 Oryza sativa 3E-43 331 36 45 0 (0) C
Os04g38970.2 7 Oryza sativa 3E-43 331 36 45 0 (0) C
Zm00001eb080490_P002 agpv5 Zea mays 1E-35 340 34 44 0 (0) C
GRMZM2G029001_P01 3.21 Zea mays 1E-35 340 34 44 0 (0) C
v1_GRMZM2G029001_P01 4a53 Zea mays 1E-35 340 34 44 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	zf-C3HC4_2(1) zf-C3HC4_3(1) zf-RING_2(1) zf-RING_4(1) zf-UDP(1)
TargetP:	Chloroplast (Class 2 C0.914; M0.070; S0.013; _0.298)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	319 aa (-cTP 271)
Molecular Weight	35.23 kDA(-cTP 29.89)
PI	5.53(-cTP 4.87)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data