PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G48020.1   hypothetical protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G62865.1 11Arabidopsis thaliana2E-4515155700 (0)_
AT5G14895.1 11Arabidopsis thaliana2E-2012545590 (0)_
AT3G01430.1 11Arabidopsis thaliana3E-1915638500 (0)_
Os02g50940.1 7Oryza sativa9E-1612838470 (0)_
Os06g12660.1 7Oryza sativa4E-148146540 (0)C
v1_GRMZM2G351832_P01 4a53Zea mays3E-1611641500 (0)_
Zm00001eb254350_P001 agpv5Zea mays3E-1611641500 (0)_
GRMZM2G351832_P01 3.21Zea mays3E-1611641500 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM:
TargetP: Chloroplast (Class 3 C0.805; M0.100; S0.025; _0.267)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 135 aa (-cTP 119)
Molecular Weight 15.64 kDA(-cTP 14.02)
PI 6.73(-cTP 9.04)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help