PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT3G48010.1 cyclic nucleotide-gated channel 16

Lab Annot.

Cyclic nucleotide gated channel 16 (CNGC16)
Mapman: 34.22 transport.cyclic nucleotide or calcium regulated channels

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G14870.1 11 Arabidopsis thaliana 0 676 63 77 0 (0) M
AT2G24610.1 11 Arabidopsis thaliana 0 702 56 70 0 (0) _
AT2G24610.2 11 Arabidopsis thaliana 0 702 56 70 0 (0) S
Os12g06570.1 7 Oryza sativa 0 628 60 76 0 (0) _
Os02g54760.1 7 Oryza sativa 0 666 55 70 0 (0) _
Os06g08850.1 7 Oryza sativa 0 597 58 73 0 (0) _
Zm00001eb118420_P002 agpv5 Zea mays 0 680 59 73 0 (0) M
Zm00001eb257480_P001 agpv5 Zea mays 0 667 57 71 0 (0) M
GRMZM2G005791_P01 3.21 Zea mays 0 667 57 71 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	cNMP_binding(1) Ion_trans(1) IQ(1) UBM(2)
TargetP:	Mitochondria (Class 3 C0.192; M0.750; S0.008; _0.088)
Predotar:
Subcel. Location:
TM-HMM prediction:	4 TMs
Aramemnon:	5 TMs
TAT position:
Length	705 aa (-cTP 664)
Molecular Weight	81.95 kDA(-cTP )
PI	8.85(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data